CDS

Accession Number TCMCG016C11925
gbkey CDS
Protein Id OMO80818.1
Location complement(join(96369..96452,96634..96760,96994..97163))
Organism Corchorus capsularis
locus_tag CCACVL1_12738

Protein

Length 126aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01010250.1
Definition LPS-induced tumor necrosis factor alpha factor [Corchorus capsularis]
Locus_tag CCACVL1_12738

EGGNOG-MAPPER Annotation

COG_category S
Description LITAF-like zinc ribbon domain
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
KEGG_ko ko:K19363        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04142        [VIEW IN KEGG]
map04142        [VIEW IN KEGG]
GOs GO:0002682        [VIEW IN EMBL-EBI]
GO:0002683        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0010363        [VIEW IN EMBL-EBI]
GO:0010941        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0031347        [VIEW IN EMBL-EBI]
GO:0031348        [VIEW IN EMBL-EBI]
GO:0034051        [VIEW IN EMBL-EBI]
GO:0043067        [VIEW IN EMBL-EBI]
GO:0043069        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045088        [VIEW IN EMBL-EBI]
GO:0045824        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048585        [VIEW IN EMBL-EBI]
GO:0050776        [VIEW IN EMBL-EBI]
GO:0050777        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0060548        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0080134        [VIEW IN EMBL-EBI]
GO:0080135        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGAGTTCCGTATTATGTGGGGATGAATCCACACCAGGCGGGAATGGTACCGCCAAACGCCATCTACGGTGATCCAAAGGGAATTCCGATTCACCAAACCATGTATCGAGATACCCCTGCTCCTTTTAGCTGCCCTTTCTGTGGTAATTCCGGACTCACCGTTGTCAGATCAAAACCAAGTCTTGCAGCACTTGTTGGTTGCATGATGCCCTTTATGCTTGGAATTTGCTTCCTTTGCCCTTCAATGGACTGCCTTTGGCATAAATATCATTATTGCCCCAAATGTTCTGAAAAGGTTGCTGACTTTGAGAAATCAGATCCATGTGCAGTGGTGGATATGCCCCAATGGGTGCAGGAGAGTTTTGCTGTGCCTGCATGA
Protein:  
MGVPYYVGMNPHQAGMVPPNAIYGDPKGIPIHQTMYRDTPAPFSCPFCGNSGLTVVRSKPSLAALVGCMMPFMLGICFLCPSMDCLWHKYHYCPKCSEKVADFEKSDPCAVVDMPQWVQESFAVPA